Information for 2-CCCCTGTGGG (Motif 5)

A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C T C G A A G T C C G T A C T A G A T C G A C T G A T C G
p-value:1e-7
log p-value:-1.710e+01
Information Content per bp:1.881
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif192.1
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets53.0 +/- 21.8bp
Average Position of motif in Background47.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGTGGG-
TCCCCTGGGGAC
 A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGTGGG-
CACCCCCGGGGGGG
 A C G T A C G T A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGTGGG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGTGGG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGTGGG--
TGCCCTGAGGGCA
 A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGTGGG--
TGCCCTGAGGGCA
 A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGTGGG--
TGCCCTGAGGGCA
 A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCCTGTGGG---
NTCCCCTCAGGGANT
 A C G T A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGTGGG
ATGCCCTGAGGC
 A C G T A C G T A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCCCTGTGGG---
-SCCTSAGGSCAW
 A T G C A G T C A T G C A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T