Information for 15-GRAKGGAGYTAAC (Motif 17)

A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T G A C T C G T A T C A G A G T C A C G T A G T C A G T C G T C A A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.306e+01
Information Content per bp:1.886
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 19.3bp
Average Position of motif in Background42.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GRAKGGAGYTAAC------
--ACTTAGTTAACTAAAAA
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GRAKGGAGYTAAC------
--CCTTAGTTAACTAAAAT
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GRAKGGAGYTAAC----
ANNNCTAGTTAACNGNN
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GRAKGGAGYTAAC
GGAGAAAGGTGCGA--
 A C G T A C G T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GRAKGGAGYTAAC
--AAGGTGTKAA-
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GRAKGGAGYTAAC-
--RGGGCACTAACY
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C A C G T
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GRAKGGAGYTAAC
---CGGAGC----
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GRAKGGAGYTAAC-
------AGATAASR
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

MYBL1/MA0776.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GRAKGGAGYTAAC---
----ACCGTTAACGGT
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GRAKGGAGYTAAC-
---NNGAGATAAGA
 A C T G C T A G C G T A A C G T A C T G A C T G C G T A C T A G A G C T A C G T C G T A C G T A A G T C A C G T
A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A