Information for 17-GCCATNTTGT (Motif 20)

A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
Reverse Opposite:
C G T A T A G C T G C A C T G A A C T G T C G A C G A T C A T G C T A G T G A C
p-value:1e-23
log p-value:-5.518e+01
Information Content per bp:1.481
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.89%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets47.1 +/- 26.3bp
Average Position of motif in Background75.6 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---GCCATNTTGT
GCNGCCATCTTG-
 A C G T A C G T A C G T A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GCCATNTTGT
GCCGCCATCTTG-
 A C G T A C G T A C G T A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCCATNTTGT
ACCATATGGT
 A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCCATNTTGT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCATNTTGT
GCCATCTGTT
 A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCATNTTGT
CGTGCCAAG----
 A C G T A C G T A C G T A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCATNTTGT
TGCCAA-----
 A C G T A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCATNTTGT
GCCATATGGT
 A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCATNTTGT
GTCCGCCATTA---
 A C G T A C G T A C G T A C G T A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCATNTTGT
AACAKATGGY
 A C T G G A T C G T A C G C T A A G C T T G A C G A C T A C G T A T C G G C A T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T