Information for 12-CTAGGCAACT (Motif 14)

T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T
Reverse Opposite:
C G T A T A C G G C A T A C G T A C T G A G T C G A T C C A G T C G T A A C T G
p-value:1e-34
log p-value:-8.019e+01
Information Content per bp:1.710
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.24%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets49.8 +/- 27.4bp
Average Position of motif in Background50.2 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTAGGCAACT-
SCCTAGCAACAG
 A C G T T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rfx1/MA0509.1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTAGGCAACT
GTTGCCATGGCAAC-
 A C G T A C G T A C G T A C G T A C G T T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAGGCAACT--
-AAGGCAAGTGT
 T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGGCAACT
KGTTGCTAGGMAACA
 A C G T A C G T A C G T A C G T A C G T T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTAGGCAACT
WDNCTGGGCA---
 A C G T A C G T A C G T T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGCAACT
NNTTGGCANN-
 A C G T T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTAGGCAACT--
TACCATAGCAACGGT
 A C G T A C G T A C G T T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTAGGCAACT
CTTGGCAA--
 T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTAGGCAACT---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTAGGCAACT
TTGCCATGGCAACN
 A C G T A C G T A C G T A C G T T G A C G C A T G T C A C A T G T A C G G T A C G T C A C G T A A T G C G A C T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C