Information for 11-ACTGTAWCTG (Motif 13)

C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A C G T C G T A G T A C C G T A A C T G A C G T
p-value:1e-35
log p-value:-8.200e+01
Information Content per bp:1.936
Number of Target Sequences with motif91.0
Percentage of Target Sequences with motif11.77%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets51.0 +/- 27.7bp
Average Position of motif in Background52.1 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACTGTAWCTG-
AATGTATCAAT
 C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACTGTAWCTG--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACTGTAWCTG--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTGTAWCTG-
-CTGTTCCTGG
 C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACTGTAWCTG--
ACTTTCACTTTC
 C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

SOX4/MA0867.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTAWCTG---
AACACTGCAATTGTTC
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Sox11/MA0869.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTAWCTG--
AACACTGAAATTGTT
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTGTAWCTG
GCTGTG----
 C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTAWCTG---
TCACTTTCACTTTCN
 A C G T A C G T C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACTGTAWCTG---
---NHAACBGYYV
 C G T A A G T C A C G T A C T G A C G T G T C A C G A T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A