Information for 9-YTYTCAGMAMMCACWG (Motif 12)

A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A G T C A C G T A C T G C G T A C T A G C G T A C T A G
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 24.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:YTYTCAGMAMMCACWG--
-------AAACCACAGAN
 A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-YTYTCAGMAMMCACWG
SCTGTCARCACC-----
 A C G T A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--YTYTCAGMAMMCACWG
NTTTCTNAGAAA------
 A C G T A C G T A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:YTYTCAGMAMMCACWG-
-------AAACCACAGC
 A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:YTYTCAGMAMMCACWG-
-------AAACCACANN
 A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:YTYTCAGMAMMCACWG
------NAAACCACAG
 A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:YTYTCAGMAMMCACWG--
-------AAATCACAGCA
 A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--YTYTCAGMAMMCACWG
NNNVCTGWGYAAACASN-
 A C G T A C G T A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:YTYTCAGMAMMCACWG---
----VAGRACAKNCTGTBC
 A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YTYTCAGMAMMCACWG--
--AGCGGCACACACGCAA
 A G T C A C G T A G T C C G A T A G T C C G T A A C T G G T C A C G T A T G A C G T A C A G T C C G T A A G T C C G A T A C T G A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A