Information for 25-SCGMGGSTYYAKRRAG (Motif 40)

A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A G C T G T C A A C G T C T G A C T A G C G T A A T C G A G T C A G T C A C T G G T A C A C T G A T G C
p-value:1e-3
log p-value:-8.968e+00
Information Content per bp:1.814
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.5 +/- 8.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:SCGMGGSTYYAKRRAG
----GGCTCYAKCAYC
 A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---SCGMGGSTYYAKRRAG
NTCGCGCGCCTTNNN----
 A C G T A C G T A C G T A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:3
Score:0.48
Offset:4
Orientation:forward strand
Alignment:SCGMGGSTYYAKRRAG----
----GAGTTCATTGAGTTCA
 A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.47
Offset:-7
Orientation:reverse strand
Alignment:-------SCGMGGSTYYAKRRAG
NNGCNCTGCGCGGC---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.47
Offset:2
Orientation:forward strand
Alignment:SCGMGGSTYYAKRRAG
--GGGGCCCAAGGGGG
 A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---SCGMGGSTYYAKRRAG
ANCGCGCGCCCTTNN----
 A C G T A C G T A C G T A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:SCGMGGSTYYAKRRAG
-BCNGGTTCTAGANCN
 A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.45
Offset:4
Orientation:reverse strand
Alignment:SCGMGGSTYYAKRRAG
----GNCTATAAAAGG
 A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.45
Offset:4
Orientation:reverse strand
Alignment:SCGMGGSTYYAKRRAG
----DGWTTTATGRCN
 A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.44
Offset:-7
Orientation:reverse strand
Alignment:-------SCGMGGSTYYAKRRAG
NAAGGGGGCGTGGCTTN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C T G G T A C A C T G A C T G A T G C A C G T A G T C A G C T C G T A A C G T C T G A C T G A C G T A A C T G
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T A C G T A C G T A C G T A C G T A C G T