Information for 5-GTCACGGTGACCCCTA (Motif 3)

A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C T A G C T A G C T A G A C G T A G T C C T G A A G T C A G T C T A C G A C G T C T A G G C T A A T G C
p-value:1e-21
log p-value:-5.005e+01
Information Content per bp:1.895
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.9 +/- 27.1bp
Average Position of motif in Background41.3 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGGTGACCCCTA
GGTCANNGTGACCTN--
 A C G T A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTCACGGTGACCCCTA
CAGGTCACCGTGACCTT--
 A C G T A C G T A C G T A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTCACGGTGACCCCTA
AGGNCANNGTGACCT---
 A C G T A C G T A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCACGGTGACCCCTA---
--NNNNTTGACCCCTNNNN
 A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PPARG/MA0066.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTCACGGTGACCCCTA
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T A C G T A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTCACGGTGACCCCTA---
--TGTCGTGACCCCTTAAT
 A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GTCACGGTGACCCCTA
-------TGACCYCT-
 A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCACGGTGACCCCTA---
--NNANTTGACCCCTNNNN
 A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCACGGTGACCCCTA
AGTCACGC---------
 A C G T A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GTCACGGTGACCCCTA------
-----NTCNTCCCCTATNNGNN
 A T C G C G A T A G T C C G T A A T G C A C T G A C T G A G C T A C T G C G T A A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A