Information for 5-GAAACCGCAA (Motif 6)

C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A
Reverse Opposite:
G C A T C G A T C T A G G T A C C T A G A C T G C A G T A C G T A G C T G A T C
p-value:1e-17
log p-value:-3.918e+01
Information Content per bp:1.690
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.88%
Number of Background Sequences with motif832.0
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets50.5 +/- 25.6bp
Average Position of motif in Background48.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GAAACCGCAA
-AAACCGCAA
 C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GAAACCGCAA-
-AAACCGCAAA
 C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

IRF8/MA0652.1/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GAAACCGCAA--
TCGAAACCGAAACT
 A C G T A C G T C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

IRF9/MA0653.1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GAAACCGCAA--
AACGAAACCGAAACT
 A C G T A C G T A C G T C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------GAAACCGCAA
CGTATCGAAACCAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GAAACCGCAA
ACTGAAACCA---
 A C G T A C G T A C G T C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GAAACCGCAA--
GAAASYGAAASY
 C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A A C G T A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GAAACCGCAA--
GAAACTGAAACT
 C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GAAACCGCAA-
-AAACCACANN
 C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GAAACCGCAA
--AACCGANA
 C T A G C T G A G T C A G T C A A G T C G A T C C A T G G A T C G C T A C G T A
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A