Information for 11-CAAAACCATGTCT (Motif 10)

A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A A G T C G C T A A C G T A C T G A T C G A C G T C G A T A C G T C G A T A T C G
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.857
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.0 +/- 22.2bp
Average Position of motif in Background50.3 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACCATGTCT
CTGATCGAAACCAAAGT-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CAAAACCATGTCT
ATAAACCGAAACCAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACCATGTCT
CGTATCGAAACCAAA---
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAAAACCATGTCT
--AAACCGGTTT-
 A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAAACCATGTCT
TCGAAACCGAAACT
 A C G T A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

GRHL1/MA0647.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAAAACCATGTCT
-AAAACCGGTTTT
 A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACCATGTCT
AACACCAAAACAAAGGA-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CAAAACCATGTCT--
-----VBSYGTCTGG
 A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAAAACCATGTCT
--AAACCACANN-
 A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAAAACCATGTCT
ACTGAAACCA-----
 A C G T A C G T A T G C C G T A C G T A C G T A C G T A A T G C A G T C G T C A C A G T C T A G A C G T A G T C A G C T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T