Information for 6-AAACTTTAAGMTTTCT (Motif 9)

C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T
Reverse Opposite:
C G T A C T A G C T G A C T G A G C T A A C T G A G T C G A C T G C A T C G T A G T C A C G T A A C T G C A G T G C A T A C G T
p-value:1e-12
log p-value:-2.794e+01
Information Content per bp:1.745
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.6 +/- 22.8bp
Average Position of motif in Background48.1 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AAACTTTAAGMTTTCT
GGTTAAACATTAA-------
 A C G T A C G T A C G T A C G T C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AAACTTTAAGMTTTCT-
---CCTTAATNGNTTTT
 C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AAACTTTAAGMTTTCT
AAACMATTAN-------
 A C G T C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AAACTTTAAGMTTTCT--
------TAAGGCGTCTTG
 C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AAACTTTAAGMTTTCT
--CCTTTGATCTTT--
 C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T
A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.47
Offset:6
Orientation:forward strand
Alignment:AAACTTTAAGMTTTCT
------CAAGCTT---
 C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-AAACTTTAAGMTTTCT
AACCCTTTGATCTTT--
 A C G T C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T

PH0088.1_Isl2/Jaspar

Match Rank:8
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----AAACTTTAAGMTTTCT
CAAAATCAATTAATTT----
 A C G T A C G T A C G T A C G T C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.47
Offset:3
Orientation:forward strand
Alignment:AAACTTTAAGMTTTCT---
---CTTTAAGTACTTAATG
 C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.46
Offset:-3
Orientation:forward strand
Alignment:---AAACTTTAAGMTTTCT
GTTAATNATTAA-------
 A C G T A C G T A C G T C G T A C G T A G T C A A G T C G C A T A C G T C G A T C G T A C T G A A C T G G T A C C G A T A G C T A G C T A G T C A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T