Information for 19-GHTCAGGAATGAT (Motif 34)

A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T
Reverse Opposite:
G C T A A C G T A G T C G T C A A G C T A G C T T G A C G T A C C G A T A T C G C G T A C A T G T G A C
p-value:1e-6
log p-value:-1.504e+01
Information Content per bp:1.649
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.61%
Number of Background Sequences with motif792.4
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets54.4 +/- 21.3bp
Average Position of motif in Background47.2 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GHTCAGGAATGAT---
AGTTATTAATGAGGTC
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GHTCAGGAATGAT
NNTNTCATGAATGT-
 A C G T A C G T A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GHTCAGGAATGAT
--TGATTGATGA-
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:forward strand
Alignment:GHTCAGGAATGAT
-------CATGAC
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

POL002.1_INR/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GHTCAGGAATGAT
----NNNANTGA-
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

PH0019.1_Dbx2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GHTCAGGAATGAT---
TTTAATTAATTAATTC
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T A C G T A C G T A C G T
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GHTCAGGAATGAT
--NCTGGAATGC-
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T
A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GHTCAGGAATGAT----
-ACTATGAATGAATGAT
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T A C G T A C G T A C G T A C G T
A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GHTCAGGAATGAT
-ATGATKGATGRC
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GHTCAGGAATGAT
--CCWGGAATGY-
 A C T G G T A C C G A T T A G C C G T A C A T G A C T G C T G A C T G A A C G T C T A G G T C A C G A T
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T