Information for 4-TTGCAATTTG (Motif 30)

A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A C G T A C T G A A C G T C G A T A T C G A T G C G T C A C G T A
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.836
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif144.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets33.1 +/- 20.0bp
Average Position of motif in Background55.4 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAATTTG---
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGCAATTTG-------
-TGGACTTTGNNCTNTG
 A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGCAATTTG---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGCAATTTG------
-TGGACTTTGNNCTCN
 A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAATTTG-----
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TTGCAATTTG
ANATTTTTGCAANTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGCAATTTG
NCTGGAATGC-
 A C G T A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTGCAATTTG
NATGTTGCAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTGCAATTTG-
TTGAATGAAATTCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTGCAATTTG
ATTTGAATT--
 A C G T A C G T A C G T A T C G T A G C C G T A G T C A G A C T A C G T C G A T A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T