Information for 1-GCAAAAAGCCGCG (Motif 3)

C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G
Reverse Opposite:
A G T C T A C G A T G C C A T G A T C G A G T C A C G T A G C T A C G T A G C T A G C T A C T G A G T C
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.724
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif5.98%
Number of Background Sequences with motif57.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets55.0 +/- 21.7bp
Average Position of motif in Background51.4 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCAAAAAGCCGCG
-----CAGCC---
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGCG--
AGCAACAGCCGCACC
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCAAAAAGCCGCG
---AACAGCTG--
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCAAAAAGCCGCG-
---AACAGCTGCAG
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGCG-
GGAGAAAGGTGCGA
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCG----
--ATAAAGGCGCGCGAT
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCAAAAAGCCGCG-
---GACAGCTGCAG
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G A C G T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCG----
--ATAAGGGCGCGCGAT
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

KLF13/MA0657.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAAAAAGCCGCG------
-CAAAAAGGGGCGTGGCAT
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCAAAAAGCCGCG
NGNGACAGCTGCN
 C T A G G T A C C T G A C T G A T G C A C T G A C G T A A C T G A T G C G A T C A T C G A G T C C T A G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A