Information for 7-GGGCCAGGCHGGCTGA (Motif 12)

A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
Reverse Opposite:
A G C T A T G C T G C A A T C G A T G C G A T C C A G T A C T G A T G C A G T C A C G T A C T G C T A G A T G C A G T C A G T C
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.765
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 19.2bp
Average Position of motif in Background25.5 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGGCCAGGCHGGCTGA
AAGGKGRCGCAGGCA------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCAGGCHGGCTGA
CAGGCCNNGGCCNN----
 A C G T A C G T A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGGCCAGGCHGGCTGA
MKGGGYGTGGCC------
 A C G T A C G T A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGCCAGGCHGGCTGA
-GTCATGCHTGRCTGS
 A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGCCAGGCHGGCTGA
GGCCCCGCCCCC----
 A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAGGCHGGCTGA
DGGGYGKGGC-------
 A C G T A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GGGCCAGGCHGGCTGA
CGCGCCGGGTCACGTA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GGGCCAGGCHGGCTGA
--GTCACGCTCNCTGA
 A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAGGCHGGCTGA
TGGGTGGGGC-------
 A C G T A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCAGGCHGGCTGA
ATGCCCGGGCATGT---
 A C G T A C T G A C T G A T C G A G T C A G T C G T C A A C T G A T C G A G T C G A C T C T A G A T C G A T G C A C G T A T C G C T G A
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T