Information for 9-GTGTCAGAAAGCCGCA (Motif 11)

A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T A T C G G C T A A G T C G T C A G T A C
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 5.6bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCAGAAAGCCGCA
AGGTGNCAGACAG-----
 A C G T A C G T A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGTCAGAAAGCCGCA
AGGTGHCAGACA------
 A C G T A C G T A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GTGTCAGAAAGCCGCA-
--------AAACCGCAA
 A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GTGTCAGAAAGCCGCA--
--------AAACCGCAAA
 A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTGTCAGAAAGCCGCA-
---GGAGAAAGGTGCGA
 A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GTGTCAGAAAGCCGCA-----
-----TCGTACCCGCATCATT
 A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:GTGTCAGAAAGCCGCA---
--------AAACCACAGAN
 A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GTGTCAGAAAGCCGCA--
--------AAACCACANN
 A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GTGTCAGAAAGCCGCA--
---AGCAACAGCCGCACC
 A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCAGAAAGCCGCA
TGAGTCAGCA-------
 A C G T A C T G A C G T T A C G C G A T A T G C C G T A A C T G C G T A C G T A C G T A A C T G A G T C G T A C C T A G A G T C C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T