Information for 8-CACAGCTGCTGCTAAC (Motif 9)

A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
Reverse Opposite:
A T C G C G A T A C G T C T G A A C T G T A G C C T G A C T A G T A G C G C T A C T A G A T G C C G A T A C T G G A C T T A C G
p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.660
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.7 +/- 26.2bp
Average Position of motif in Background42.6 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CACAGCTGCTGCTAAC
-NCAGCTGCTG-----
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CACAGCTGCTGCTAAC
AGCAGCTGCTNN----
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CACAGCTGCTGCTAAC--
---AGATGCTRCTRCCHT
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CACAGCTGCTGCTAAC
CTCAGCAGCTGCTACTG--
 A C G T A C G T A C G T A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CACAGCTGCTGCTAAC
---AGCAGCTGCT---
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACAGCTGCTGCTAAC
--CAGCTGNT------
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACAGCTGCTGCTAAC
CGCAGCTGCG------
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACAGCTGCTGCTAAC
-ACAGCTGTTV-----
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACAGCTGCTGCTAAC
TGCAGCTGTCCCT---
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACAGCTGCTGCTAAC
GACAGCTGCAG-----
 A T G C C T G A T A G C G C T A A T C G A G T C C G A T A C T G G A T C A G C T A T C G T G A C G A C T T C G A G C T A A T G C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T