Information for 2-TGTGGTTTYD (Motif 2)

C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
Reverse Opposite:
G A C T T C G A G C T A C T G A C T G A A G T C A G T C G T C A G A T C G T C A
p-value:1e-75
log p-value:-1.732e+02
Information Content per bp:1.684
Number of Target Sequences with motif171.0
Percentage of Target Sequences with motif21.38%
Number of Background Sequences with motif1798.2
Percentage of Background Sequences with motif3.76%
Average Position of motif in Targets51.0 +/- 25.9bp
Average Position of motif in Background50.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTYD
NNTGTGGTTT--
 A C G T A C G T C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTYD
CTGTGGTTTN-
 A C G T C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTYD
GCTGTGGTTT--
 A C G T A C G T C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTYD
GTCTGTGGTTT--
 A C G T A C G T A C G T C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.94
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTYD
NNHTGTGGTTWN-
 A C G T A C G T A C G T C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTYD
TTTGCGGTTT--
 A C G T A C G T C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTYD
TTGCGGTTT--
 A C G T C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTYD-
TGTGGATTNNN
 C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGTGGTTTYD
-GTGGAT---
 C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTYD
NNTGTGGATTSS
 A C G T A C G T C A G T C T A G C A G T C T A G C T A G G A C T G A C T C G A T A G C T C T G A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G