Information for 9-AGCCACAGGTGGCTTT (Motif 12)

C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A C T A G G T A C A G T C C G T A A G T C G T A C A C G T T A C G A G C T A C T G A T C G A G T C C G A T
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.4 +/- 18.6bp
Average Position of motif in Background66.5 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCACAGGTGGCTTT
GAGCAACAGGTGGTT--
 A C G T C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCCACAGGTGGCTTT
ATGCAACAGGTGG----
 A C G T C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:-11
Orientation:reverse strand
Alignment:-----------AGCCACAGGTGGCTTT
RGGCAMTAGGGAGCCATRGAAGGTK--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGCCACAGGTGGCTTT
AAACCACAGAN------
 A C G T C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGCCACAGGTGGCTTT
TNCCATATATGG----
 C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AGCCACAGGTGGCTTT
-----NNTGTGGTTT-
 C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGCCACAGGTGGCTTT
SCAGYCADGCATGAC---
 A C G T A C G T C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--AGCCACAGGTGGCTTT
CGTGCCAAG---------
 A C G T A C G T C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:AGCCACAGGTGGCTTT
---AACAGATGGC---
 C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:AGCCACAGGTGGCTTT
---NACATATGGN---
 C G T A A C T G A T G C A G T C C T G A A T G C G T C A A C T G C T A G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T