p-value: | 1e-9 |
log p-value: | -2.181e+01 |
Information Content per bp: | 1.914 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.62% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.3 +/- 21.4bp |
Average Position of motif in Background | 58.0 +/- 5.3bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.20 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCCCAGAGAGGCA TGCCCAGNHW---- |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCCAGAGAGGCA-- TCCCAGMCRAGCCCC |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCCCAGAGAGGCA --CCAGACRSVB- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCCCAGAGAGGCA---- --SCAGYCADGCATGAC |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCCCAGAGAGGCA --CCAGACAG--- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCCAGAGAGGCA- CAAATCCAGACATCACA |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCCCAGAGAGGCA --CTTGAGTGGCT |
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PB0140.1_Irf6_2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCCCAGAGAGGCA NNNACCGAGAGTNNN- |
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EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCCCAGAGAGGCA GTCCCCAGGGGA--- |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GCCCAGAGAGGCA----- -------AAGGCAAGTGT |
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