Information for 23-CAGTTAGAGVGGA (Motif 28)

A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
Reverse Opposite:
A G C T T G A C G A T C A C G T T A G C A C G T A T G C A G C T C T G A G T C A G T A C A C G T A C T G
p-value:1e-6
log p-value:-1.575e+01
Information Content per bp:1.697
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif167.8
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets41.2 +/- 22.7bp
Average Position of motif in Background54.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGTTAGAGVGGA
TGGCAGTTGG------
 A C G T A C G T A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTTAGAGVGGA
CACGGCAGTTGGTNN---
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTAGAGVGGA
TGGCAGTTGN------
 A C G T A C G T A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTAGAGVGGA
BRRCVGTTDN------
 A C G T A C G T A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CAGTTAGAGVGGA
NNNTGGCAGTTGGTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGTTAGAGVGGA
VCAGGTRDRY----
 A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGTTAGAGVGGA
GGCVGTTR-------
 A C G T A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTTAGAGVGGA
NNNNTGCCAGTGATTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTAGAGVGGA
CACAGN---------
 A C G T A C G T A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CAGTTAGAGVGGA-
-------AGAGGAA
 A G T C G T C A A C T G A C G T A G C T C T G A T A C G C G T A A C T G T G C A C T A G A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A