Information for 12-CTGGGCAGAAAGGAAA (Motif 21)

A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A
Reverse Opposite:
A C G T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A T C G
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.868
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 28.3bp
Average Position of motif in Background51.7 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CTGGGCAGAAAGGAAA--
------AGAAACGAAAGT
 A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTGGGCAGAAAGGAAA---
-----GAGAACCGAAACTG
 A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGCAGAAAGGAAA-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGCAGAAAGGAAA-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTGGGCAGAAAGGAAA--
------GAAAMTGAAACT
 A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCAGAAAGGAAA
WDNCTGGGCA---------
 A C G T A C G T A C G T A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTGGGCAGAAAGGAAA-
-------NACAGGAAAT
 A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGGGCAGAAAGGAAA
---GGAACAAAGR---
 A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTGGGCAGAAAGGAAA-
-----CGGAAGTGAAAC
 A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGGGCAGAAAGGAAA
---AAAACAAAGG---
 A T G C A C G T A C T G A C T G T A C G T A G C C G T A C T A G C G T A C G T A C G T A A C T G C T A G C T G A C G T A C G T A
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T