Information for 9-TTGTTAAGGSAAGAGR (Motif 13)

A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
Reverse Opposite:
A G C T A T G C A C G T T A G C G A C T A G C T A T C G A G T C G T A C A G C T A G C T C G T A T C G A T G A C G T C A T C G A
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.705
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif48.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets41.5 +/- 22.9bp
Average Position of motif in Background48.4 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTGTTAAGGSAAGAGR
TAAACTGATAAGAAGAT---
 A C G T A C G T A C G T A C G T A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTGTTAAGGSAAGAGR
---CTAATKGV-----
 A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTGTTAAGGSAAGAGR-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTGTTAAGGSAAGAGR
--GKTAATGR------
 A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTGTTAAGGSAAGAGR
-----AAGGCAAGTGT
 A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTAAGGSAAGAGR
NNCGTTGCTATGGNN-----
 A C G T A C G T A C G T A C G T A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTGTTAAGGSAAGAGR
CAGATAAGGN------
 A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TTGTTAAGGSAAGAGR
-GGATGATGCAATA--
 A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
A C G T C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.49
Offset:-8
Orientation:reverse strand
Alignment:--------TTGTTAAGGSAAGAGR
NTNNNNNGTTGCTANGGNNCANA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TTGTTAAGGSAAGAGR
NBWGATAAGR-------
 A C G T A G C T A C G T A C T G A G C T A C G T T C G A C T G A C A T G C T A G T A G C C T G A C T G A A T C G C G T A A T C G C T G A
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T