Information for 5-ACAGAAACCTCAGMCT (Motif 9)

C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
Reverse Opposite:
T C G A C T A G C A T G A G T C A C G T A T C G C G T A C T A G A T C G A C G T A C G T G C A T A G T C C G A T A C T G A G C T
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.759
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.5 +/- 23.2bp
Average Position of motif in Background30.2 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACAGAAACCTCAGMCT
---GWAAYHTGAKMC-
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACAGAAACCTCAGMCT
---GWAAYHTGABMC-
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACAGAAACCTCAGMCT
----AAACCACAGAN-
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACAGAAACCTCAGMCT
---NAAACCACAG---
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACAGAAACCTCAGMCT
----AAACCACAGC--
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACAGAAACCTCAGMCT
----AAACCACANN--
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACAGAAACCTCAGMCT
----AAACCGCAAA--
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACAGAAACCTCAGMCT
ACTGAAACCA------
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACAGAAACCTCAGMCT
----AAACCGCAA---
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACAGAAACCTCAGMCT
AATGCCACGTCATC--
 C T G A A G T C C G T A C T A G C G T A T C G A C G T A A T G C A G T C C G A T A T G C C G T A C T A G G T A C A G T C A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T A C G T