Information for 8-GAAGGAGTTCCCG (Motif 9)

A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G
Reverse Opposite:
A T G C A C T G A C T G A C T G C G T A C G T A G A T C A C G T G T A C A G T C A C G T G A C T G T A C
p-value:1e-13
log p-value:-3.211e+01
Information Content per bp:1.812
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.3 +/- 29.4bp
Average Position of motif in Background63.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:GAAGGAGTTCCCG----
-------TTCCCGCCWG
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAAGGAGTTCCCG---
----VDTTTCCCGCCA
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAAGGAGTTCCCG--
-----NYTTCCCGCC
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAAGGAGTTCCCG
---GGAAANCCCC
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGGAGTTCCCG
GGGGGAATCCCC-
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GAAGGAGTTCCCG---
-----NNTTCCCGCCC
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAAGGAGTTCCCG
--GGGAATTTCC-
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GAAGGAGTTCCCG--
-----DTTTCCCGCC
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAGGAGTTCCCG----
---NNACTTCCTCTTNN
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GAAGGAGTTCCCG-----
------TTTCCCGCCMAV
 A C T G C G T A G T C A C T A G A C T G C G T A C T A G C G A T A C G T A G T C G T A C A G T C T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C