Information for 7-WKGTAGGKMWMAGSKG (Motif 8)

C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G
Reverse Opposite:
A G T C T G A C A T G C A G T C A C G T A C G T C G A T A C G T G T C A A G T C A G T C A G C T C G T A A T G C G T C A C G T A
p-value:1e-14
log p-value:-3.237e+01
Information Content per bp:1.790
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.2 +/- 20.5bp
Average Position of motif in Background47.7 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:WKGTAGGKMWMAGSKG-
--GTAGGGCAAAGGTCA
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G A C G T
A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:WKGTAGGKMWMAGSKG-
---TAGGGCAAAGGTCA
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G A C G T
A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WKGTAGGKMWMAGSKG-
---TGGGGCAAAGGTCA
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G A C G T
A C G T A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:WKGTAGGKMWMAGSKG
----AGGAAACAGCTG
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G
A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:WKGTAGGKMWMAGSKG--
-----NGNGACAGCTGCN
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---WKGTAGGKMWMAGSKG
TATAAGTAGGTCAA-----
 A C G T A C G T A C G T C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:WKGTAGGKMWMAGSKG-
---GAGGTCAAAGGTCA
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G A C G T
A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:WKGTAGGKMWMAGSKG-
---GAGGTCAAAGGTCA
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G A C G T
A C G T A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:WKGTAGGKMWMAGSKG-
--AGGGGTCAGAGGTCA
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G A C G T
A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:WKGTAGGKMWMAGSKG
AAYTAGGTCA------
 C G A T A C G T A T C G C G A T C T G A A C T G A C T G C A G T G T C A C G T A G T C A C G T A A C T G A T C G A C T G A C T G
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T