Information for 11-STTTCTAAGGGAGCGG (Motif 16)

A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
Reverse Opposite:
G A T C G T A C C A T G A G T C A G C T A G T C A G T C A G T C A G C T C G A T C T G A C A T G G C T A C G T A G T C A T A C G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.687
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.7 +/- 25.8bp
Average Position of motif in Background39.2 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:STTTCTAAGGGAGCGG----
-TTTCGAGCGGAACGGTCGC
 A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:STTTCTAAGGGAGCGG
----CTAATKGV----
 A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:STTTCTAAGGGAGCGG
--TTCTNMGGAA----
 A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:STTTCTAAGGGAGCGG
GTTGCCATGGNAAC--
 A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---STTTCTAAGGGAGCGG
NNCGTTGCTATGGNN----
 A C G T A C G T A C G T A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:STTTCTAAGGGAGCGG----
---NNNAAGGGGGCGGGNNN
 A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------STTTCTAAGGGAGCGG
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--STTTCTAAGGGAGCGG
AGNGTTCTAATGANN---
 A C G T A C G T A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---STTTCTAAGGGAGCGG
NCCGTTGCTANGNGN----
 A C G T A C G T A C G T A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:STTTCTAAGGGAGCGG
--------CGGAGC--
 A T G C A C G T C G A T C A G T G A T C A G C T G C T A C T G A T C A G C T A G A C T G C T G A T C A G G A T C A C T G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T