Information for 6-TCTGGCGCCA (Motif 9)

A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G C T A G A G T C C T A G A T G C G T A C C T G A A C T G C T G A
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.854
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif87.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets28.5 +/- 21.6bp
Average Position of motif in Background53.9 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TCTGGCGCCA--
TTTGGCGCCAAA
 A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCGCCA-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TCTGGCGCCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGCGCCA-
TTTTCGCGCGAA
 A C G T A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C G T
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCGCCA
GGTCTGGCAT--
 A C G T A C G T A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCGCCA
TGTCTGDCACCT
 A C G T A C G T A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

CREB1/MA0018.2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTGGCGCCA
--TGACGTCA
 A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A
A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCTGGCGCCA
CTGTCTGTCACCT
 A C G T A C G T A C G T A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ZBTB33/MA0527.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCTGGCGCCA----
CTCTCGCGAGATCTG
 A C G T A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTGGCGCCA--
--TGACGTCATC
 A G C T A G T C A G C T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C