Information for 4-AACCTGCAGG (Motif 3)

T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G
Reverse Opposite:
T G A C A G T C A C G T A T C G A T G C C G T A A T C G A C T G A G C T A C G T
p-value:1e-15
log p-value:-3.584e+01
Information Content per bp:1.849
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif285.8
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets44.9 +/- 21.8bp
Average Position of motif in Background52.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AACCTGCAGG
SNGCACCTGCHS-
 A C G T A C G T A C G T T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AACCTGCAGG
NCACCTGTN--
 A C G T T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AACCTGCAGG--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACCTGCAGG
NNCACCTGNN--
 A C G T A C G T T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACCTGCAGG---
-CACAGCAGGGGG
 T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACCTGCAGG--
--CCTGCTGAGH
 T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AACCTGCAGG
RYHYACCTGB---
 A C G T A C G T A C G T T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACCTGCAGG
AACACCTGCT--
 A C G T A C G T T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACCTGCAGG
CGCACCTGCT--
 A C G T A C G T T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACCTGCAGG---
CCACACAGCAGGAGA
 A C G T A C G T T G C A T C G A G T A C A T G C C G A T A T C G A T G C C G T A A C T G A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A