Information for 8-ATAAATTGTC (Motif 11)

T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C
Reverse Opposite:
C A T G G T C A A T G C C G T A C G T A C G A T A C G T A C G T C G T A A G C T
p-value:1e-9
log p-value:-2.256e+01
Information Content per bp:1.845
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif77.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets36.3 +/- 24.1bp
Average Position of motif in Background55.0 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--ATAAATTGTC-----
GGAAAAATTGTTAGGAA
 A C G T A C G T T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATAAATTGTC-----
-AAAATTGTTATGAA
 T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATAAATTGTC---
NNATNAATTGTTTNN
 A C G T A C G T T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATAAATTGTC
-CTCATTGTC
 T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATAAATTGTC-----
GTATCTATTGTTCTTTA
 A C G T A C G T T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C A C G T A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATAAATTGTC------
AATCAATTGTTCCGCTA
 A C G T T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATAAATTGTC-----
AANTTATTGTTCTNNA
 A C G T T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATAAATTGTC
NGYCATAAAWCH--
 A C G T A C G T A C G T A C G T T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATAAATTGTC
GCAATAAAA----
 A C G T A C G T A C G T T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------ATAAATTGTC
AAAGGTAATAAAATTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G A T C G T A C G T A C G T A C G A T A C G T A T C G A C G T G A T C
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T