Information for 4-CTGAGCTTGTTCA (Motif 5)

A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
Reverse Opposite:
C A G T A C T G C T G A T C G A A G T C C G T A C T G A T A C G G A T C A G C T A G T C C G T A A C T G
p-value:1e-17
log p-value:-4.065e+01
Information Content per bp:1.796
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif16.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.8 +/- 26.6bp
Average Position of motif in Background56.4 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGCTTGTTCA
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCTTGTTCA-
GCTGACCTTGAACTN
 A C G T A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCTTGTTCA
BNTGDCCTTG----
 A C G T A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGCTTGTTCA
AACACTGCAATTGTTC-
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGAGCTTGTTCA
-TGACCTTGAT--
 A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGAGCTTGTTCA
-TGACCTTGAV--
 A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGCTTGTTCA
AACACTGAAATTGTT--
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGAGCTTGTTCA
CTGACCTTTG---
 A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGAGCTTGTTCA
NTGACCTTGA---
 A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGAGCTTGTTCA
-TGACCTTGAN--
 A G T C C G A T A C T G C T G A C T A G A T G C A G C T A C G T C T A G A G C T A G C T A G T C G C T A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T