Information for 2-CAAGCCTGGA (Motif 2)

T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A
Reverse Opposite:
A G C T A T G C G T A C C G T A A T C G C A T G G A T C C G A T C A G T A T C G
p-value:1e-28
log p-value:-6.513e+01
Information Content per bp:1.663
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif14.64%
Number of Background Sequences with motif1878.1
Percentage of Background Sequences with motif4.14%
Average Position of motif in Targets44.9 +/- 25.0bp
Average Position of motif in Background49.3 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAGCCTGGA
-AGGCCTNG-
 T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGCCTGGA
CAAGCTT---
 T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAAGCCTGGA---
ACATGCCCGGGCAT
 A C G T T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAGCCTGGA
-AGGCCTAG-
 T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Pax6/MA0069.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAAGCCTGGA
AANTCATGCGTGAA
 A C G T A C G T A C G T A C G T T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAAGCCTGGA--------
RRCATGYCHGGACWTGYYYN
 A C G T A C G T T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAAGCCTGGA----
CAGGCCNNGGCCNN
 T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCCTGGA----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCCTGGA
NNACTTGCCTT--
 A C G T A C G T A C G T T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCCTGGA
RCATTCCWGG-
 A C G T T A G C G C T A G C T A C A T G G T A C T A G C G C A T C A T G T A C G T C G A
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T