Information for 3-GCCAAASAGGYTMYAR (Motif 10)

A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T C T A G A C G T C G T A C T A G A G T C A G T C A C G T A T G C A C G T A G C T A C G T A T C G A C T G A G T C
p-value:1e-11
log p-value:-2.551e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.4 +/- 27.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAASAGGYTMYAR
TGCCAA-----------
 A C G T A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCAAASAGGYTMYAR
CGTGCCAAG----------
 A C G T A C G T A C G T A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCAAASAGGYTMYAR
AGCCAATCGG-------
 A C G T A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GCCAAASAGGYTMYAR
AAATGGACCAATCAG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCCAAASAGGYTMYAR
ACTAGCCAATCA--------
 A C G T A C G T A C G T A C G T A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCAAASAGGYTMYAR
--AAAACCGGTTTT--
 A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCAAASAGGYTMYAR
GGTGCCAAGT---------
 A C G T A C G T A C G T A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCAAASAGGYTMYAR
---AAACCGGTTT---
 A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GCCAAASAGGYTMYAR
TTGCCAAG----------
 A C G T A C G T A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:10
Score:0.48
Offset:-7
Orientation:reverse strand
Alignment:-------GCCAAASAGGYTMYAR
VAAACYKGTHWAACMRGTTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A T G C C G T A C T G A C G T A A T C G C G T A A C T G A C T G A G T C A C G T T G A C A G T C C G T A C T A G
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T A C G T A C G T A C G T