Information for 15-RAGRRATTTYTCC (Motif 19)

C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C
Reverse Opposite:
C T A G A C T G C T G A C T A G C G T A C G T A C G T A A C G T A G C T A G C T A G T C A G C T A G T C
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.870
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 10.4bp
Average Position of motif in Background21.8 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.63
Offset:7
Orientation:forward strand
Alignment:RAGRRATTTYTCC-
-------TTTTCCA
 C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----RAGRRATTTYTCC
AGGGAAGTCATTTCT--
 A C G T A C G T A C G T A C G T C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:RAGRRATTTYTCC---
------ATTTTCCATT
 C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:forward strand
Alignment:RAGRRATTTYTCC---
------ATTTTCCATT
 C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:RAGRRATTTYTCC---
------ATTTTCCATT
 C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:RAGRRATTTYTCC---
------ATTTTCCATT
 C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RAGRRATTTYTCC--
TNNNATGATTTCNNCNN
 A C G T A C G T C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RAGRRATTTYTCC
NGGGGATTTCCC-
 C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RAGRRATTTYTCC
CNGTGATTTN---
 C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--RAGRRATTTYTCC
CCTTGCAATTTTTNN
 A C G T A C G T C T A G C T G A A C T G C T G A C T G A C G T A A C G T A C G T A C G T A G T C A G C T A G T C A G T C
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C