Information for 9-GCGCTGACAC (Motif 13)

A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C
Reverse Opposite:
A C T G C G A T A C T G C G A T A T G C C T G A A C T G G T A C A C T G A T G C
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.829
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif187.2
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets49.1 +/- 28.1bp
Average Position of motif in Background50.0 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCGCTGACAC-
-VGCTGWCAVB
 A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCGCTGACAC-
-TGCTGACTCA
 A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGCTGACAC-
GGTGYTGACAGS
 A C G T A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCGCTGACAC
-ARNTGACA-
 A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCGCTGACAC
---TTGACAG
 A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCGCTGACAC
--RHTGWCAR
 A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGCTGACAC
AATTTGCTGAC--
 A C G T A C G T A C G T A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGCTGACAC
AAAATGCTGACT-
 A C G T A C G T A C G T A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGCTGACAC------
ATAAATGACACCTATCA
 A C G T A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCGCTGACAC--
----TGACACCT
 A T C G G T A C C A T G G T A C A G C T A T C G G C T A G T A C G C T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T