Information for 7-CACATAAACC (Motif 5)

G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C
Reverse Opposite:
A C T G A C T G A C G T A G C T A C G T C T G A A C G T A C T G A C G T A C T G
p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.853
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.0 +/- 19.3bp
Average Position of motif in Background46.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CACATAAACC-
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACATAAACC
CCYMATAAAA-
 A C G T G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACATAAACC
ACCACTTAA---
 A C G T A C G T G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACATAAACC
ACCACTTAA---
 A C G T A C G T G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACATAAACC
ACCACTTGAA--
 A C G T A C G T G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACATAAACC
CCAATAAAAC
 G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACATAAACC
-AAATAAACA
 G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

NFIL3/MA0025.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CACATAAACC
ANGTTACATAA---
 A C G T A C G T A C G T A C G T G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACATAAACC-
GCCATAAATCA
 G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C A C G T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CACATAAACC--
----TAATCCCN
 G T A C C G T A A G T C C G T A A G C T T G C A C T G A T G C A G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G