Information for 4-GGCWCMCACA (Motif 4)

C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A
Reverse Opposite:
A G C T A T C G C G A T T A C G C A G T A C T G G C T A T C A G G T A C G A T C
p-value:1e-12
log p-value:-2.956e+01
Information Content per bp:1.459
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.28%
Number of Background Sequences with motif447.4
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets45.4 +/- 24.5bp
Average Position of motif in Background47.7 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGCWCMCACA--
--CRCCCACGCA
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T A C G T
A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCWCMCACA--
YCCGCCCACGCN
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCWCMCACA---
-NWAACCACADNN
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGCWCMCACA---
AGCGGCACACACGCAA
 A C G T A C G T A C G T C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGCWCMCACA---
--AAACCACAGAN
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GGCWCMCACA----
----GGCACGCGTC
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCWCMCACA
HTTTCCCASG
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCWCMCACA---
-GCGACCACACTG
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T A C G T A C G T
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGCWCMCACA-
---TCACACCT
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGCWCMCACA--
--AAACCACAGC
 C T A G C A T G A G T C C G A T T G A C G T C A A T G C G C T A T A G C T C G A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C