Information for 4-HGTTCYCACV (Motif 5)

G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A
Reverse Opposite:
A C G T T A C G C G A T A C T G C T G A T C A G C G T A C G T A T G A C C T G A
p-value:1e-18
log p-value:-4.262e+01
Information Content per bp:1.642
Number of Target Sequences with motif135.0
Percentage of Target Sequences with motif16.19%
Number of Background Sequences with motif3234.2
Percentage of Background Sequences with motif7.05%
Average Position of motif in Targets49.7 +/- 26.1bp
Average Position of motif in Background50.3 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:HGTTCYCACV
HTTTCCCASG
 G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:HGTTCYCACV--
--TTMACACCTT
 G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A A C G T A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:HGTTCYCACV-
-TTTCACACCT
 G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:HGTTCYCACV-
-ATTAACACCT
 G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A A C G T
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--HGTTCYCACV-----
NNTTTTCACACCTTNNN
 A C G T A C G T G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:HGTTCYCACV-
-KTTCACACCT
 G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A A C G T
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-HGTTCYCACV--
NTTTTCACACCTT
 A C G T G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:HGTTCYCACV--
--TTCACACCTT
 G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A A C G T A C G T
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:HGTTCYCACV
ATTTTCCATT
 G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:HGTTCYCACV--
-CTTCACACCTA
 G A C T A C T G A C G T A C G T A G T C G A C T G T A C C G T A A T G C T G C A A C G T A C G T
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A