Information for 12-ACTGCAGTCA (Motif 22)

C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A
Reverse Opposite:
C G A T A T C G G C T A T G A C A C G T A T C G A G T C C T G A A T C G C G A T
p-value:1e-7
log p-value:-1.787e+01
Information Content per bp:1.827
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif106.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets39.3 +/- 22.6bp
Average Position of motif in Background45.0 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAGTCA-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

TGIF1/MA0796.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACTGCAGTCA
TGACAGCTGTCA
 A C G T A C G T C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A
G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACTGCAGTCA
TGACAGCTGTCA
 A C G T A C G T C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACTGCAGTCA
TGACAGGTGTCA
 A C G T A C G T C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------ACTGCAGTCA
AGAGRRACAGCWGAC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACTGCAGTCA-
---BCAGACWA
 C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACTGCAGTCA-
---CCAATCAA
 C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACTGCAGTCA-
---CCAGACAG
 C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACTGCAGTCA-
---GCTGTCAA
 C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACTGCAGTCA---
---CCAGACRSVB
 C G T A A T G C A G C T C T A G A T G C C G T A A C T G C G A T A T G C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C