Information for 1-GAAACCACAW (Motif 2)

C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A
Reverse Opposite:
C G A T A C G T A C T G G A C T T C A G C T A G A C G T C A G T C A G T G T A C
p-value:1e-36
log p-value:-8.445e+01
Information Content per bp:1.594
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif14.03%
Number of Background Sequences with motif1572.9
Percentage of Background Sequences with motif3.43%
Average Position of motif in Targets49.1 +/- 27.2bp
Average Position of motif in Background50.0 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:forward strand
Alignment:GAAACCACAW-
-AAACCACANN
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GAAACCACAW
NAAACCACAG
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GAAACCACAW--
NWAACCACADNN
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:GAAACCACAW-
-AAACCACAGC
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:GAAACCACAW--
-AAACCACAGAN
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GAAACCACAW-
-AAACCGCAAA
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GAAACCACAW
-AAACCGCAA
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GAAACCACAW
--ATCCAC--
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GAAACCACAW
ACTGAAACCA---
 A C G T A C G T A C G T C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAAACCACAW--
GCGACCACCGAA
 C A T G G T C A G T C A T G C A A G T C A G T C C T G A T G A C T G C A G C T A A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A