Information for 20-ATGACAGTCATTGGMA (Motif 43)

G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
Reverse Opposite:
A G C T A C G T A G T C G T A C C G T A C T G A A C G T C T A G G C T A A G T C A C G T A C T G C G A T G T A C G C T A A C G T
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.746
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.8 +/- 9.5bp
Average Position of motif in Background72.4 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ATGACAGTCATTGGMA----
----CAATCACTGGCAGAAT
 G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATGACAGTCATTGGMA
CAAATCCAGACATCACA-
 A C G T A C G T G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATGACAGTCATTGGMA
AGGGAAGTCATTTCT-
 G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATGACAGTCATTGGMA
ATGCCAGACN------
 G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATGACAGTCATTGGMA
----CNGTGATTTN--
 G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.53
Offset:10
Orientation:forward strand
Alignment:ATGACAGTCATTGGMA
----------TTGGCA
 G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATGACAGTCATTGGMA
AGGTGHCAGACA------
 A C G T A C G T G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:ATGACAGTCATTGGMA
------GTCATN----
 G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATGACAGTCATTGGMA
NNATTGACAGGTGCTT---
 A C G T A C G T A C G T G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATGACAGTCATTGGMA
SCTGTCAVTCAV-----
 A C G T G T C A C A G T A C T G G C T A G T A C C G T A A C T G C A G T A G T C C G T A A G C T C G A T A C T G T C A G G T C A C T G A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T