Information for 22-CTGGCGATGATTG (Motif 38)

T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G
Reverse Opposite:
T G A C C G T A T G C A A C G T T A G C C G T A A C G T A T G C C A T G A G T C A T G C T C G A A T C G
p-value:1e-8
log p-value:-1.908e+01
Information Content per bp:1.680
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif273.5
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets51.6 +/- 24.5bp
Average Position of motif in Background50.3 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:CTGGCGATGATTG-
------TTGATTGN
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGGCGATGATTG------
--TNNNATGATTTCNNCNN
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGGCGATGATTG-----
AGAGTGCTGATTGGTCCA
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTGGCGATGATTG----
-----TTTGATTGATGN
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGGCGATGATTG
---GCAGTGATTT
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGGCGATGATTG-
----CNGTGATTTN
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

EN2/MA0642.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTGGCGATGATTG--
-----GNTAATTGGN
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGGCGATGATTG--------
------CTGATTGGTCNATTT
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTGGCGATGATTG------
-------TGATTGGCTANN
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGGCGATGATTG-----
------ATGATKGATGRC
 T A G C A C G T A T C G C T A G G T A C T A C G G T C A C G A T A T C G G T C A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C