Information for 10-STTTAAYACWKTT (Motif 23)

A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A G T A C C G A T A C T G A C G T C T G A A C G T A C G T C G T A C G T A C G T A A T G C
p-value:1e-10
log p-value:-2.326e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 25.1bp
Average Position of motif in Background72.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:STTTAAYACWKTT
-TTTAAT------
 A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:STTTAAYACWKTT
--TTMACACCTT-
 A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:STTTAAYACWKTT
-TTTCACACCTN-
 A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T

PH0126.1_Obox6/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:STTTAAYACWKTT--
CNATAATCCGNTTNT
 A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---STTTAAYACWKTT
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:STTTAAYACWKTT
-ATTAACACCT--
 A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----STTTAAYACWKTT
NNNTTTNTAATACNG--
 A C G T A C G T A C G T A C G T A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---STTTAAYACWKTT
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--STTTAAYACWKTT--
NNTTTTCACACCTTNNN
 A C G T A C G T A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---STTTAAYACWKTT
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A T C G A C G T A C G T C G A T C G T A C G T A A G C T C G T A G T A C C G T A A C T G A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A