Information for 11-TTWGGCAGAAGAGTAA (Motif 14)

C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
Reverse Opposite:
C G A T A C G T G T C A G A T C C A G T G A T C A G C T C A G T T G A C A C G T A C T G A T G C A G T C G C A T C G T A C G T A
p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.692
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif41.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets42.9 +/- 27.8bp
Average Position of motif in Background50.6 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTWGGCAGAAGAGTAA
NNTTGGCANN-------
 A C G T C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTWGGCAGAAGAGTAA
CTTGGCAA--------
 C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTWGGCAGAAGAGTAA
NTTGGCANN-------
 C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTWGGCAGAAGAGTAA
-TTGGCA---------
 C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTWGGCAGAAGAGTAA
NNNNTTGGGCACNNCN----
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTWGGCAGAAGAGTAA
AAAATATGCATAATAAA--
 A C G T A C G T A C G T C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTWGGCAGAAGAGTAA
TTTGGCGGGAAA----
 C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTWGGCAGAAGAGTAA
NGTGGGCAT--------
 A C G T C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTWGGCAGAAGAGTAA-
-----CGGAAGTGAAAC
 C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTWGGCAGAAGAGTAA
GGTTGGCAT--------
 A C G T C G A T A C G T C G T A C T A G A T C G G T A C C G T A A C T G G C T A C T G A C A T G G C T A C A T G C A G T G T C A C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T