Information for 3-GTAACCACAA (Motif 4)

T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A
Reverse Opposite:
G C A T A C G T C A T G G C A T A C T G C A T G C A G T A C G T C G T A A T G C
p-value:1e-25
log p-value:-5.925e+01
Information Content per bp:1.665
Number of Target Sequences with motif129.0
Percentage of Target Sequences with motif13.83%
Number of Background Sequences with motif2212.7
Percentage of Background Sequences with motif4.80%
Average Position of motif in Targets51.2 +/- 27.5bp
Average Position of motif in Background51.1 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GTAACCACAA
NAAACCACAG
 T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GTAACCACAA-
-AAACCACANN
 T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:GTAACCACAA-
-AAACCACAGC
 T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GTAACCACAA--
NWAACCACADNN
 T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GTAACCACAA--
-AAACCACAGAN
 T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GTAACCACAA-
-AAACCGCAAA
 T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GTAACCACAA
-AAACCGCAA
 T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GTAACCACAA
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C G T A C G T T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTAACCACAA
NDGTAAACARRN
 A C G T A C G T T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTAACCACAA
DGTAAACA---
 A C G T T A C G G C A T T G C A G T C A G T A C T G A C C G T A G T A C T G C A C G T A
C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T