p-value: | 1e-15 |
log p-value: | -3.660e+01 |
Information Content per bp: | 1.895 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 1.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.4 +/- 29.0bp |
Average Position of motif in Background | 42.3 +/- 9.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TACTGGATTGCCA TGATTRATGGCY- |
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PB0068.1_Sox1_1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TACTGGATTGCCA NNNTATTGAATTGNNN |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TACTGGATTGCCA ATGATKGATGRC-- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TACTGGATTGCCA-- ------CGTGCCAAG |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TACTGGATTGCCA --GTTAATGGCC- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TACTGGATTGCCA-- -------TTGCCAAG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | TACTGGATTGCCA- --------TGCCAA |
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NFIA/MA0670.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TACTGGATTGCCA--- ------GGTGCCAAGT |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TACTGGATTGCCA TGATTTATGGCC- |
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HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TACTGGATTGCCA TGATTTATGGCC- |
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