Information for 2-WTTGGCCKGSATGTTT (Motif 3)

C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A T G C A T A G C C G T A A C G T T A G C A T G C G T A C C T A G A C T G A G T C G T A C C G T A C G T A G C T A
p-value:1e-20
log p-value:-4.644e+01
Information Content per bp:1.764
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 18.0bp
Average Position of motif in Background28.6 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WTTGGCCKGSATGTTT
-TTGGCA---------
 C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---WTTGGCCKGSATGTTT
CCGATTGGCT---------
 A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WTTGGCCKGSATGTTT
NTTGGCANN-------
 C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--WTTGGCCKGSATGTTT
TGATTGGCTANN------
 A C G T A C G T C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WTTGGCCKGSATGTTT
TTTGGCGGGAAA----
 C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---WTTGGCCKGSATGTTT
CTGATTGGTCNATTT----
 A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-WTTGGCCKGSATGTTT
NNTTGGCANN-------
 A C G T C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:WTTGGCCKGSATGTTT
----GCCGCCATCTTG
 C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-WTTGGCCKGSATGTTT
TTTTGGCGGGAAAA---
 A C G T C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:forward strand
Alignment:WTTGGCCKGSATGTTT----
--------SCHTGTTTACAT
 C G A T A C G T A C G T A C T G A C T G G T A C A G T C A C T G A T C G A T C G T G C A C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T