Information for 10-GACGGAGAGGCMAGGA (Motif 22)

A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
Reverse Opposite:
A C G T A T G C A G T C A G C T C A T G A C T G G A T C A T G C A C G T G T A C C G A T A G T C A G T C A T C G A G C T A G T C
p-value:1e-13
log p-value:-3.177e+01
Information Content per bp:1.773
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 22.8bp
Average Position of motif in Background37.0 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GACGGAGAGGCMAGGA-
------AAGGCAAGTGT
 A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACGGAGAGGCMAGGA
TGAGTGACAGSC-----
 A C G T A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GACGGAGAGGCMAGGA
AGGTGHCAGACA----
 A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GACGGAGAGGCMAGGA
RGTGGGYGTGGC-----
 A C G T A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GACGGAGAGGCMAGGA
-DGGGYGKGGC-----
 A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GACGGAGAGGCMAGGA
AGGTGNCAGACAG---
 A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GACGGAGAGGCMAGGA
-------AGGCCTNG-
 A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GACGGAGAGGCMAGGA
-AAGGKGRCGCAGGCA
 A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GACGGAGAGGCMAGGA
NNNACCGAGAGTNNN---
 A C G T A C G T A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:GACGGAGAGGCMAGGA
-GGGGNGGGGC-----
 A C T G C T G A A T G C C T A G A C T G G C T A C A T G C G T A A T C G C T A G A G T C G T A C C T G A A C T G A T C G G T C A
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T