Information for 5-GTGAYTATCM (Motif 16)

A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C
Reverse Opposite:
A C T G A T C G C G T A A C G T C G T A C T A G C G A T A G T C G T C A A T G C
p-value:1e-14
log p-value:-3.394e+01
Information Content per bp:1.773
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.1 +/- 18.0bp
Average Position of motif in Background34.2 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTGAYTATCM---
TAGTGATCATCATTA
 A C G T A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GTGAYTATCM-
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGAYTATCM---
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GTGAYTATCM--
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTGAYTATCM--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGAYTATCM
NCGTGACN----
 A C G T A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGAYTATCM
GGTAATTAGC-
 A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTGAYTATCM--
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0122.1_Obox2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GTGAYTATCM--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGAYTATCM
RGGATTAR--
 A T C G A C G T C T A G C G T A G A T C A C G T G T C A C G A T T A G C T G A C
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T