Information for 2-TACTCTATGC (Motif 6)

C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C
Reverse Opposite:
C A T G A G T C T G C A A G C T C T G A A T C G C G T A A C T G A C G T G T C A
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.664
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.02%
Number of Background Sequences with motif459.3
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets54.2 +/- 25.7bp
Average Position of motif in Background49.9 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX1/MA0754.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TACTCTATGC
TAATCGATAA
 C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TACTCTATGC---
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

CUX2/MA0755.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TACTCTATGC
TAATCGATAA
 C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TACTCTATGC
AAATCACTGC
 C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TACTCTATGC-------
TNNATTATGCATANNTT
 C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TACTCTATGC--
NNTAATCCNGNCNN
 A C G T A C G T C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

POU3F4/MA0789.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TACTCTATGC----
-----TATGCAAAT
 C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------TACTCTATGC
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TACTCTATGC----
CCATTGTATGCAAAT
 A C G T C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TACTCTATGC
HNRAATCAAT--
 A C G T A C G T C A G T T G C A T G A C G C A T A T G C G A C T T C G A A C G T T C A G G T A C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T